Announcements & Documents
Muhtemel Ders Programı
Announcement
10/10/2020
2020-2021 Güz Dönemi Mikrobiyal Biyoteknoloji Ders İzlencesi
Announcement
9/29/2020
2020-2021 Güz Dönemi Mikrobiyal Biyoteknoloji Ders İzlencesi ekte sunulmuştur
2020-2021 Güz Dönemi Moleküler Biyoloji Dersi İzlencesi
Announcement
9/29/2020
2020-2021 Güz Dönemi Moleküler Biyoloji Dersi İzlencesi ekte sunulmuştur
2020-2021 Güz Dönemi Genetik Mühendisliği Dersi İzlencesi
Announcement
9/29/2020
2020-2021 Güz Dönemi Genetik Mühendisliği Dersi İzlencesi ekte sunulmuştur
Education Information
2005 - 2011
2005 - 2011Doctorate
Middle East Technical University, Graduate School Of Natural And Applied Sciences, Biyoteknoloji , Turkey
2002 - 2005
2002 - 2005Postgraduate
Middle East Technical University, Graduate School Of Natural And Applied Sciences, Biyoteknoloji , Turkey
1998 - 2002
1998 - 2002Undergraduate
Middle East Technical University, Fen Edebiyat Fakültesi, Biyoloji , Turkey
Dissertations
2011
2011Doctorate
Selective quantification of viable Escherichia coli cells in biosolids upon propidium monoazide treatment by quantitative PCR
Middle East Technical University, Fen Bilimleri Enstitüsü, Biyoteknoloji
2005
2005Postgraduate
Effect of homologous multiple copies of aspartokinase gene on cephamycin C biosynthesis in Streptomyces clavuligerus
Middle East Technical University, Fen Bilimleri Enstitüsü, Biyoteknoloji
Foreign Languages
B2 Upper Intermediate
B2 Upper IntermediateEnglish
Research Areas
Life Sciences
Biotechnology
Microbial Biotechnology
Molecular Biology and Genetics
Microbial Genetics
Natural Sciences
Academic Titles / Tasks
2018 - Continues
2018 - ContinuesAssistant Professor
Van Yüzüncü Yil University, Ziraat Fakültesi, Tarımsal Biyoteknoloji Bölümü
2016 - 2018
2016 - 2018Assistant Professor
Van Yüzüncü Yil University, Ziraat Fakültesi, Tarımsal Biyoteknoloji Bölümü
2011 - 2016
2011 - 2016Research Assistant PhD
Ondokuz Mayis University, Fen Edebiyat Fakültesi, Biyoloji
2002 - 2011
2002 - 2011Research Assistant
Middle East Technical University, Fen Edebiyat Fakültesi, Biyoloji
Managerial Experience
2021 - 2021
2021 - 2021Coordinator of The Rectorate
Van Yüzüncü Yil University, Ziraat Fakültesi, Tarımsal Biyoteknoloji Bölümü
Non Academic Experience
2009 - 2010
2009 - 2010Research Assistant
Villanova University/Faculty of Engineering/Environmental Biotechnology
Courses
Advising Theses
Continues
ContinuesPostgraduate
INVESTIGATION OF THE RESISTANCE OF BACTERIAL ISOLATES HARBOURING PLANT GROWTH-PROMOTING MARKERS TO SOME ABIOTIC STRESS CONDITIONS UNDER IN VITRO CONDITIONS
Taşkın B. (Advisor)
Ş.DEMİR(Student)
2024
2024Postgraduate
ELUCIDATION OF BIOACTIVE METABOLITE PRODUCTION POTENTIAL OF ENDOPHYTE BACTERIAL ISOLATES BY WHOLE GENOME SEQUENCING AND POLYPHASIC CHARACTERISATION
Taşkın B. (Advisor)
T.ORUÇ(Student)
2023
2023Postgraduate
WHOLE GENOME ANALYSIS, BIOCHEMICAL CHARACTERIZATION AND INVESTIGATION OF RESISTANCE TO SOME METALS OF G15S1 ENDOPHYTE BACTERIAL ISOLATE
Taşkın B. (Advisor)
R.GÖK(Student)
2022
2022Postgraduate
Çeşitli tek yıllık bitkilerden izole edilmiş olan endofit bakterilerde siderofor üretim potansiyelleri
Taşkın B. (Advisor)
Ş.ATBAŞ(Student)
2020
2020Postgraduate
TAHIL BİTKİLERİNDEN İZOLE EDİLMİŞ OLAN ENDOFİT BAKTERİLERDE BİYOTEKNOLOJİK ÖNEME SAHİP BAZI ENZİMLERİN BELİRLENMESİ
Taşkın B. (Advisor)
G.DOĞAN(Student)
Published journal articles indexed by SCI, SSCI, and AHCI
2023
2023Start-up strategies of electromethanogenic reactors for methane production from cattle manure
Ghaderikia A., Taşkın B., YILMAZEL TOKEL Y. D.
Waste Management
, vol.159, pp.27-38, 2023 (SCI-Expanded)
2021
2021Hydrolytic Enzymes Producing Bacterial Endophytes of Some Poaceae Plants
Doğan G., Taşkın B.
Polish Journal Of Microbiology , vol.70, no.3, pp.297-304, 2021 (SCI-Expanded)
2020
2020Antibacterial activity of different kefir types against various plant pathogenic bacteria
Taşkın B., Akköprü A.
Tarim Bilimleri Dergisi
, vol.26, no.3, pp.316-323, 2020 (SCI-Expanded)
2018
2018Exploring the genetic variations and population structure of Turkish pepper (Capsicum annuum L.) genotypes based on peroxidase gene markers
Akyavuz R., Taşkın B., Koçak M., Yıldız M.
3 BIOTECH
, vol.8, no.8, 2018 (SCI-Expanded)
2013
2013The effect of managing nutrients in the performance of anaerobic digesters of municipal wastewater treatment plants
Demirer S. U., Taskin B., Demirer G. N., Duran M.
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
, vol.97, no.17, pp.7899-7907, 2013 (SCI-Expanded)
2012
2012High level multiple antibiotic resistance among fish surface associated bacterial populations in non-aquaculture freshwater environment
Ozaktas T., Taskin B., GÖZEN A. G.
WATER RESEARCH
, vol.46, no.19, pp.6382-6390, 2012 (SCI-Expanded)
2011
2011Selective Quantification of Viable Escherichia coli Bacteria in Biosolids by Quantitative PCR with Propidium Monoazide Modification
Taskin B., GÖZEN A. G., Duran M.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY
, vol.77, no.13, pp.4329-4335, 2011 (SCI-Expanded)
Articles Published in Other Journals
2024
2024Effect of Different Metals on Synthesis of Siderophores by Endophyte Bacteria Isolated from Various Annual Plants
Atbaş Ş., Taşkın B.
Yüzüncü Yıl Üniversitesi Ziraat Fakültesi Tarım Bilimleri Dergisi , vol.34, no.3, pp.409-419, 2024 (Peer-Reviewed Journal)
2022
2022Gökkuşağı Alabalıklarından (Oncorhynchus mykiss) İzole Edilen Patojen Bakteri İzolatlarının Hidrolitik Enzim Aktiviteleri ve Siderofor Üretim Yetenekleri
Taşkın B., Önalan Ş.
Yüzüncü Yıl Üniversitesi Fen Bilimleri Enstitüsü Dergisi , vol.27, no.3, pp.512-520, 2022 (Peer-Reviewed Journal)
2021
2021Identification and Antimicrobial Activity of Actinobacteria Isolated from Rhizosphere of the Local Endemic Plants
Özakın S., Taşkın B., Bostancı E. İ.
Yuzuncu Yil University Journal of Agricultural Sciences , vol.31, no.4, pp.876-885, 2021 (Peer-Reviewed Journal)
2020
2020Kefiran Ekstraktının Bazı Bitki Patojeni Bakterilerine Karşı Antimikrobiyal Etkisinin Değerlendirilmesi
Taşkın B.
Turkish Journal of Agriculture - Food Science and Technology , vol.8, no.4, pp.889-894, 2020 (Peer-Reviewed Journal)
2017
2017Novel Approaches for Monitoring Viable Pathogenic Microorganisms in Environmental Samples
Taşkın B.
YYÜ Journal of Agricultural Sciences , vol.27, no.2, pp.285-291, 2017 (Scopus)
2010
2010Homologous expression of aspartokinase (ask) gene in Streptomyces clavuligerus and its hom-deleted mutant: Effects on cephamycin C production
Özcengiz G., Okay S., Ünsaldi E., Taşkin B., Lıras P., Pıret J.
Bioengineered Bugs
, vol.1, no.3, pp.191-197, 2010 (Scopus)
Refereed Congress / Symposium Publications in Proceedings
2023
2023EFFECT OF PEG-INDUCED DROUGHT STRESS ON SOME ENDOPHYTE BACTERIAL ISOLATES
Taşkın B.
12th INTERNATIONAL İSTANBUL SCIENTIFIC RESEARCH CONGRESS ON LIFE, ENGINEERING, AND APPLIED SCIENCES, İstanbul, Turkey, 21 - 23 January 2023, pp.70
2022
2022In vitro Antibacterial Activity of Various Types of Extracts of Streptomyces Isolated from Rhizosphere of the Local Endemic Plants Against Several Plant Pathogenic Bacteria
Taşkın B., Kum E., Akköprü A., İnce E.
5 th International Eurasian Conference on Biological and Chemical Sciences, Ankara, Turkey, 23 November - 25 December 2022, pp.156
2022
2022Siderophore Production and Heavy Metal Relationship in Endophyte Bacteria Isolated from Various Cereal Crops
Atbaş Ş., Taşkın B.
7th International Congress on Applied Biological Science (ICABS), Adana, Turkey, 1 - 02 November 2022, pp.22
2022
2022In Vitro Antibacterial Effect Of Several Endophytic Bacteria Isolated from Various Cereal Plants against Erwinia amylovora (Ea) and Clavibacter michiganensis Subsp. michiganensis (Cmm) Plant Pathogens
Özcan Yardım D., Taşkın B.
IV International Conference of Food, Agriculture, and Veterinary Sciences, Van, Turkey, 27 - 28 May 2022, pp.342-343
2022
2022Screening of copA Gene, The Marker Of the copABCDRS Operon, In Some Endophytic Bacteria Isolates
Taşkın B.
EUROASIA SUMMIT 5th INTERNATIONAL APPLIED SCIENCES CONGRESS, Varna, Bulgaria, 15 - 16 January 2022, pp.85
2021
2021Determination of ACC Deaminase Enzyme Production and Nitrogen Fixation Characteristics of Endophytic Bacteria
Özcan Yardım D., Uçar C. P., Taşkın B., Atbaş Ş., Akköprü A.
2nd International Congress of the Turkish Journal of Agriculture - Food Science and Technology, Niğde, Turkey, 25 - 29 October 2021, pp.64
2021
2021Comparison of Two Differential Media in Screening of Entophytic Bacteria for Siderophore Production
Atbaş Ş., Taşkın B., Uçar C. P., Özcan Yardım D., Akköprü A.
3RD INTERNATIONAL CONFERENCE ON FOOD, AGRICULTURE AND ANIMAL SCIENCES 13-17 OCTOBER 2021 Erzurum, TURKEY, Erzurum, Turkey, 13 - 17 October 2021, pp.51
2021
2021Potential of Endophytic Bacteria Isolated from Various Cereal Plants to Produce Some Extracellular Enzymes of Biotechnological Importance
Doğan G., Taşkın B.
10th International Molecular Biology and Biotechnology Congress, Adana, Turkey, 4 - 08 October 2021, pp.59
2021
2021Van G lü Havzasındaki Yabani ve Kültüre Alınan Buğdaygil Türlerinden Endofit Bakteri İzolasyonu ve Karakterizasyonu
Pınar Uçar C., Akköprü A., Taşkın B., Özcan Yardım D., Arpalı D.
8. Uluslararası Katılımlı Bitki Koruma Kongresi, Bolu, Turkey, 24 August 2021 - 28 January 2022, pp.255
2018
2018Alternative and Innovative Approaches for Controlling Crop Bacterial Diseases
Taşkın B., Solmaz F. G.
2nd International Symposium on Innovative Approaches in Scientific Studies, Samsun, Turkey, 30 November - 02 December 2018, pp.24
2018
2018Endophytes: New Opportunities for Biotechnological Applications
Taşkın B., Solmaz F. G.
2nd International Symposium on Innovative Approaches in Scientific Studies, Samsun, Turkey, 30 November - 02 December 2018, pp.23
2018
2018In vitro Evaluation of Antimicrobial Activity of Kefir Products from Different Origins Against Various Plant Pathogens
Taşkın B., Akköprü A.
International Agricultural Science Congress, Van, Turkey, 9 - 12 May 2018, pp.24
2009
2009Metabolic engineering of aspartate pathway for increased production of cephamycin C in Streptomyces clavuligerus
Okay S., Ünsaldı E., Taşkın B., Kurt A., Piret J., Liras P., et al.
BIOTECH METU 2009, International Symposium on Biotechnology: Developments and Trends, Ankara, Turkey, 27 - 30 October 2009, pp.99
2009
2009Isolation and identification of multiple antibiotic resistance bacteria from surface mucus of freshwater fish
Özaktaş T., Taşkın B., Gözen A. G.
3rd FEMS Congress of European Microbiologists, Gothenburg, Sweden, 28 June - 02 July 2009, pp.82
2008
200816s rRNA gene sequence analysis and partial biochemical characterization of the fish associated bacteria isolated from lake Mogan in Turkey
Taşkın B., Solmaz G., Gözen A. G.
XII. International Congress of Bacteriology and Applied Microbiology, IUMS, İstanbul, Turkey, 5 August - 09 May 2008, pp.148
2007
2007Streptomyces clavuligerus’un parental suşunda ve homoserin dehidrogenaz bloke mutantında aspartokinaz geninin homolog çoklu kopyalarının sefamisin C üretimine etkisinin karşılaştırılması
Taşkın B., Çaydaşı A. K., Özcengiz G.
XV. Ulusal Biyoteknoloji Kongresi, Antalya, Turkey, 01 October 2007, pp.299
2006
2006Aspartate pathway engineering for improving cephamycin C yields in S. clavuligerus
Taşkın B., Çaydaşı A. K., Yılmaz E. İ., Özcengiz G.
2nd FEMS Congress of European Microbiologists, Madrid, Spain, 4 - 06 July 2006, pp.128
2006
2006Effect of homologous copies of ask gene on cephamycin C biosynthesis in Streptomyces clavuligerus
Taşkın B., Tunca S., Özcengiz G.
31st FEBS Congress: Molecules in Health and Disease, İstanbul, Turkey, 24 - 29 June 2006, pp.325
2005
2005Streptomyces clavuligerus aspartokinaz (ask) geninin çoklu kopyalarının sefamisin C üretici organizmada oluşturulması için yaklaşımlar
Taşkın B., Tunca S., Özcengiz G.
XIV. Ulusal Biyoteknoloji Kongresi, Erzurum, Turkey, 01 August 2005, pp.606
Books & Book Chapters
2019
2019Dizi Karşılaştırmaları ve Dizi-Temelli Veri Tabanı Aramaları
Son Y. A., Taşkın B.
in: Uygulamalı Biyoinformatik, Tunçer M., Ay H., Editor, Palme Yayınevi, Ankara, pp.35-49, 2019
Supported Projects
2024 - Continues
2024 - ContinuesCeviz Yetiştiriciliği için Sürdürülebilir Mikrobiyal Stratejiler: Rizosfer Mikrobiyomu ve Aktinomisetlerin Rolü
Project Supported by Higher Education Institutions
Akköprü A. (Executive), PELLEGRİNİ M., DJEBAILI R., FARDA B., Taşkın B., Rezaee Danesh Y., et al.
2023 - 2024
2023 - 2024Endofit Bakteri İzolatlarının Tüm Genom Dizilemesi ve Polifazik Karaterizasyonu ile Biyoaktif Metabolit Üretme Potansiyellerinin Açığa Çıkarılması
Project Supported by Higher Education Institutions
Taşkın B. (Executive), ORUÇ T.
2022 - 2023
2022 - 2023Endofit Bakteri G15S1 İzolatının Tüm Genom Dizilemesi Biyokimyasal Karakterizasyonu ve Bazı Ağır Metallere Karşı Duyarlılığının İncelenmesi
Project Supported by Higher Education Institutions
Taşkın B. (Executive), GÖK R.
2020 - 2023
2020 - 2023
Van Gölü havzasındaki kültür ve yabani buğdaygil türlerinden Endofit Bakteri izolasyonu karakterizasyonu ve bu bakterilerin kuraklık stresi ve bitki gelişimine olan etkinliklerinin belirlenmesi
Project Supported by Higher Education Institutions
Akköprü A. (Executive), Taşkın B., Arpalı D., Özcan Yardım D., UÇAR C. P.
2019 - 2022
2019 - 2022Çeşitli tek yıllık bitkilerden izole edilmiş olan endofit bakterilerde siderofor üretim potansiyelleri
Project Supported by Higher Education Institutions
Taşkın B. (Executive), ATBAŞ Ş.
2018 - 2020
2018 - 2020Tahıl Bitkilerinden İzole Edilmiş Olan Endofit Bakterilerde Biyoteknolojik Öneme Sahip Bazı Enzimlerin Belirlenmesi
Project Supported by Higher Education Institutions
Taşkın B. (Executive), DOĞAN G.
2017 - 2019
2017 - 2019Kefiran Ekstraktının Bitki Patojeni Bakteriler Üzerindeki Antibakteriyel Etkisinin İn Vitro Koşullarda İncelenmesi
Project Supported by Higher Education Institutions
Taşkın B. (Executive), DEMİREL A.
2017 - 2018
2017 - 2018International Agricultural Science Congress
Project Supported by Higher Education Institutions
Demir S. (Executive), Rişvanlı M. R., ÖZDEMİR B., Arvas Ö., Kaya İ., Zorer Çelebi Ş., et al.
Scientific Refereeing
June 2022
June 2022Project Supported by Higher Education Institutions
BAP Research Project, Ondokuz Mayis University, Turkey
May 2022
May 2022Project Supported by Higher Education Institutions
BAP Research Project, Yildiz Technical University, Turkey
May 2020
May 2020Project Supported by Higher Education Institutions
BAP MSc, Akdeniz University, Turkey
February 2020
February 2020Yüzüncü Yıl Üniversitesi Tarım Bilimleri Dergisi
National Scientific Refreed Journal
February 2020
February 2020Project Supported by Higher Education Institutions
January 2020
January 2020International Journal of Life Sciences and Biotechnology
National Scientific Refreed Journal
November 2019
November 2019Project Supported by Higher Education Institutions
June 2019
June 2019Yüzüncü Yıl Üniversitesi Tarım Bilimleri Dergisi
National Scientific Refreed Journal
March 2019
March 2019International Journal of Life Sciences and Biotechnology
National Scientific Refreed Journal
Tasks In Event Organizations
Ağustos 2022
Ağustos 2022I.Uygulamalı Moleküler Teknikler Çalıştayı
Workshop Organization
Taşkın B., Önalan Ş.
Van, Turkey
Eylül 2020
Eylül 2020Bakterilerde biyoinformatik
Workshop Organization
Önalan Ş., Görgişen G., Taşkın B., Yavuz H. İ., Sancak T., Rişvanlı M. R., et al.
Van, Turkey
Mobility Activity
2009 - 2010
2009 - 2010Faculty Training Programme
Scientific Research
Villanova University, United States Of America
Scholarships
2006 - 2010
2006 - 20102211-TÜBİTAK Yurt İçi Doktora Bursu
TUBITAK
1999 - 2002
1999 - 2002ODTÜ Mezunlar Derneği Lisans Bursu
University
Citations
Total Citations (WOS): 123
h-index (WOS): 4
Jury Memberships
March-2024
March 2024Doctorate
Doctorate - Koç Üniversitesi
November-2022
November 2022Post Graduate
Post Graduate - Orta Doğu Teknik Üniversitesi
September-2022
September 2022Post Graduate
Post Graduate - Ondokuz Mayıs Üniversitesi
August-2022
August 2022Post Graduate
Post Graduate - Ondokuz Mayıs Üniversitesi
September-2021
September 2021Post Graduate
Post Graduate - Orta Doğu Teknik Üniversitesi
June-2021
June 2021Post Graduate
Post Graduate - Van Yüzüncü Yıl Üniversitesi
December-2019
December 2019Doctoral Examination
Doktora Yeterlilik Sınav Jürisi - Van Yüzüncü Yıl Üniversitesi
August-2019
August 2019Post Graduate
Post Graduate - Orta Doğu Teknik Üniversitesi
May-2019
May 2019Post Graduate
Tez Savunma Jürisi - Van Yüzüncü Yıl Üniversitesi
May-2019
May 2019Post Graduate
Tez Savunma Jürisi - Van Yüzüncü Yıl Üniversitesi
January-2019
January 2019Post Graduate
Post Graduate - Dicle Üniversitesi
January-2019
January 2019Doctorate
Doctorate - Dicle Üniversitesi
Scientific Research / Working Group Memberships
2019 - Continues
2019 - Continues